yatah - Yet Another TAxonomy Handler
Provides functions to manage taxonomy when lineages are described with strings and ranks separated with special patterns like "|*__" or ";*__".
Last updated
cladestaxonomy
4.65 score 6 stars 15 scripts 192 downloads
scimo - Extra Recipes Steps for Dealing with Omics Data
Omics data (e.g. transcriptomics, proteomics, metagenomics...) offer a detailed and multi-dimensional perspective on the molecular components and interactions within complex biological (eco)systems. Analyzing these data requires adapted procedures, which are implemented as steps according to the 'recipes' package.
Last updated
4.40 score 5 stars 5 scripts 190 downloads
evabic - Evaluation of Binary Classifiers
Evaluates the performance of binary classifiers. Computes confusion measures (TP, TN, FP, FN), derived measures (TPR, FDR, accuracy, F1, DOR, ..), and area under the curve. Outputs are well suited for nested dataframes.
Last updated
classifiermeasurespredictorsroc-curvestatistics
4.10 score 6 stars 14 scripts 181 downloads